Taxon	HAKU.02057.04	HAKU.04092.05	HAKU.04287.03	HAKU.06449.04	HAKU.06601.03	HAKU.07991.04	HAKU.12368.03	HAKU.14131.03	HAKU.14257.05	HAKU.14257.06	HAKU.15133.03	HAKU.15133.05	HAKU.17022.02	HAKU.17043.03	HAKU.17282.03	HAKU.19356.04	HAKU.22968.06	HAKU.23313.04	HAKU.24962.03
Bacteroidetes_[G-5] bacterium_HMT_511 (SP1)	0	53	0	0	0	3	13	0	4	4	0	0	1	4	16	12	0	0	0
Bacteroidetes_[G-5] bacterium_HMT_507 (SP104)	0	8	0	0	0	0	0	0	1	0	1	64	6	8	0	0	0	0	0
Prevotella oris (SP105)	57	80	0	58	92	11	12	36	18	58	37	63	35	43	32	60	1557	103	43
Veillonella sp._HMT_917 (SP106)	0	134	0	0	0	99	3	4	5	6	1	1	1	36	264	85	3	12	0
Fusobacterium nucleatum (SP107)	360	88	0	14	43	21	133	69	7	36	163	219	156	97	59	64	208	31	99
Fusobacterium nucleatum_subsp._vincentii (SP108)	12	179	0	450	0	22	27	73	25	55	168	298	240	65	2	22	74	171	7
Kingella sp._HMT_012 (SP113)	2	31	0	0	29	21	41	3	12	70	84	102	0	12	83	23	8	52	4
Eikenella corrodens (SP115)	19	7	0	20	3	2	7	5	4	6	30	33	2	2	6	3	5	10	16
Tannerella serpentiformis (SP116)	9	0	0	0	13	1	0	5	0	5	14	19	1	4	3	1	4	3	6
Selenomonas noxia (SP129)	5	9	0	10	27	14	38	17	27	57	8	39	1	1	5	1	80	9	67
Leptotrichia trevisanii (SP130)	10	10	0	78	7	1	8	8	7	6	10	6	5	2	45	6	21	3	11
Peptostreptococcaceae_[XI][G-2] bacterium_HMT_091 (SP131)	0	2	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	1
Leptotrichia wadei (SP135)	669	13	0	12	96	3	50	32	172	8	41	217	15	22	10	17	69	146	37
Mitsuokella sp._HMT_521 (SP140)	82	47	0	0	12	1	11	12	13	5	0	0	2	3	0	0	7	3	0
Leptotrichia sp._HMT_498 (SP145)	3084	41	0	19	70	3	84	68	51	56	35	93	16	79	3	25	22	228	465
Butyrivibrio sp._HMT_080 (SP146)	0	0	0	12	0	41	0	0	0	0	4	11	0	6	0	0	4	0	0
Lachnospiraceae_[G-8] bacterium_HMT_500 (SP147)	0	5	0	0	1	0	0	0	0	0	5	4	24	1	0	0	8	0	0
Shuttleworthia satelles (SP148)	1	11	0	33	1	0	0	0	28	2	9	15	9	1	0	0	87	18	0
Capnocytophaga leadbetteri (SP151)	55	5	0	79	54	8	23	3	1	25	16	103	4	9	73	21	7	13	35
Erysipelotrichaceae_[G-1] bacterium_HMT_905 (SP154)	0	1	0	8	0	0	0	0	2	0	0	1	0	0	0	0	123	3	0
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_874 (SP155)	7	0	0	32	1	67	19	0	0	3	6	12	5	0	10	4	0	2	13
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_345 (SP156)	9	0	0	6	1	0	13	0	0	0	0	8	1	2	0	0	1	0	1
Parvimonas micra (SP169)	1	37	0	36	0	21	6	20	6	2	28	75	6	0	1	0	71	50	5
Selenomonas dianae (SP183)	6	2	0	0	0	0	0	0	0	11	0	11	1	2	0	5	0	0	5
Ruminococcaceae_[G-2] bacterium_HMT_085 (SP187)	10	355	0	12	1	156	0	17	9	3	7	4	9	13	0	2	11	29	5
Haemophilus parahaemolyticus (SP188)	0	0	0	20	0	211	0	0	0	0	23	0	0	0	481	504	294	1	187
Prevotella sp._HMT_396 (SP191)	5	0	0	0	0	0	1	15	0	0	2	0	9	1	38	1	0	0	2
Ottowia sp._HMT_894 (SP194)	0	0	0	27	0	0	0	0	0	0	1	4	0	0	0	4	0	0	0
Alloprevotella sp._HMT_914 (SP197)	4	5	0	24	0	2	0	3	17	1	6	1	12	36	2	2	0	1	8
Treponema amylovorum (SP2)	0	2	0	0	0	12	0	3	22	12	0	34	8	0	0	0	303	73	0
Leptotrichia sp._HMT_392 (SP208)	42	2	0	5	23	12	41	6	0	1	28	63	12	6	1	6	1	9	76
Treponema sp._HMT_262 (SP235)	1	3	0	9	0	0	7	0	0	0	9	2	117	1	0	0	0	61	1
Solobacterium moorei (SP238)	23	63	0	19	0	78	3	13	0	0	11	12	32	13	12	3	137	25	7
Bulleidia extructa (SP239)	0	6	0	26	0	19	0	4	0	0	9	15	0	0	0	0	0	18	0
Absconditabacteria_(SR1)_[G-1] bacterium_HMT_875 (SP240)	0	0	0	8	0	0	0	1	0	0	0	0	9	0	0	0	0	0	3
Neisseria sp._HMT_018 (SP241)	0	0	0	0	0	0	3	0	0	26	11	4	0	0	0	2	23	0	1
Rothia dentocariosa (SP248)	41	463	0	62	1153	58	294	22	271	89	413	240	189	122	16	70	167	1509	49
Leptotrichia hofstadii (SP249)	68	12	0	25	30	1	147	24	12	27	29	60	28	21	1	10	49	68	154
Peptidiphaga gingivicola (SP253)	8	42	0	26	55	1	3	0	289	9	16	4	2	3	0	28	1	82	5
Eikenella halliae (SP257)	5	7	0	23	85	17	22	4	8	59	83	207	10	11	22	37	3	35	48
Oribacterium sp._HMT_078 (SP258)	6	11	0	5	5	0	4	1	12	1	13	12	1	1	6	0	92	14	0
Prevotella pleuritidis (SP261)	1	93	0	31	0	0	10	8	0	13	82	23	9	8	4	1	69	11	1
Prevotella veroralis (SP262)	50	13	0	68	68	2	25	17	63	10	36	57	22	0	21	4	103	105	0
Bergeyella sp._HMT_931 (SP265)	1	4	0	11	0	29	14	25	0	1	0	3	0	2	4	1	0	12	0
Abiotrophia defectiva (SP268)	357	9	0	212	227	132	242	9	0	29	478	274	338	22	2	29	5	95	227
Prevotella sp._HMT_305 (SP277)	0	95	0	0	0	31	0	17	0	0	0	0	0	1	26	10	0	0	0
Alloprevotella tannerae (SP28)	20	43	0	97	13	18	13	59	80	13	23	27	12	62	0	5	1819	37	39
Capnocytophaga granulosa (SP282)	33	10	0	23	37	5	23	8	3	38	31	729	6	4	63	8	11	12	32
Veillonella sp._HMT_780 (SP284)	115	253	0	576	0	381	252	242	54	75	64	86	127	693	9	106	12	1333	365
Prevotella salivae (SP297)	204	309	0	0	57	375	7	185	49	67	19	121	66	12	370	75	66	195	17
Leptotrichia shahii (SP298)	1156	59	0	68	112	23	124	20	50	92	26	301	29	169	49	74	74	244	832
Dialister invisus (SP299)	171	16	0	83	9	1	2	29	9	7	30	15	12	8	0	3	1586	23	3
Leptotrichia buccalis (SP3)	96	0	0	0	12	22	29	33	8	9	24	38	32	28	2	11	8	37	116
Streptococcus hongkongensis (SP30)	16	18	0	0	2	17	0	1	8	3	13	5	28	11	5	99	1	6	45
Aggregatibacter actinomycetemcomitans (SP300)	9	245	0	747	0	23	0	0	45	95	85	143	31	9	0	0	0	0	0
Bacteroidetes_[G-5] bacterium_HMT_505 (SP301)	0	30	0	12	0	8	0	0	13	7	15	11	62	17	1	0	90	0	0
Capnocytophaga sp._HMT_332 (SP306)	1	1	0	8	12	3	27	3	2	9	3	22	1	3	7	3	0	2	24
Tannerella forsythia (SP307)	0	9	0	9	0	2	0	0	1	2	13	51	52	13	1	0	0	0	0
Lautropia mirabilis (SP309)	500	1309	0	331	2090	69	1168	67	391	4149	413	267	146	56	698	39	140	148	602
Ruminococcaceae_[G-1] bacterium_HMT_075 (SP316)	134	1	0	38	56	8	68	25	5	15	7	12	28	24	4	1	26	17	31
Veillonella dispar (SP317)	861	111	0	156	155	34	668	95	121	170	63	204	154	165	112	571	105	198	55
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_sulci (SP323)	3	16	0	1	0	40	0	1	0	0	9	0	30	5	7	4	1	0	5
Prevotella histicola (SP331)	249	2989	0	26	30	678	17	686	9	20	24	20	259	199	1259	777	88	115	24
Prevotella sp._HMT_313 (SP333)	274	292	0	13	4	11	0	230	0	13	39	25	177	94	51	339	9	73	15
Prevotella pallens (SP335)	67	223	0	19	35	250	8	70	0	5	8	54	108	25	152	42	0	117	16
Prevotella sp._HMT_526 (SP341)	0	0	0	0	0	1	0	0	0	0	1	13	2	0	0	0	0	0	0
Alloprevotella sp._HMT_912 (SP36)	35	4	0	6	78	8	12	0	0	7	4	17	4	3	0	1	35	0	3
Neisseria oralis (SP362)	290	117	0	1635	141	91	121	155	140	1613	632	173	107	94	433	183	495	155	1776
Prevotella sp._HMT_443 (SP366)	1	0	0	0	0	5	0	0	0	0	17	19	9	6	0	0	0	0	0
Capnocytophaga sputigena (SP37)	35	26	0	35	127	17	146	26	5	46	35	140	16	9	108	45	1	11	72
Cardiobacterium valvarum (SP375)	8	16	0	58	2	12	0	1	0	16	17	8	0	1	13	1	9	4	67
Rothia mucilaginosa (SP376)	603	1255	0	1165	539	912	551	43	79	536	1336	567	1534	2878	343	4771	39	328	1852
Fusobacterium sp._HMT_248 (SP377)	11	34	0	0	0	38	5	3	0	11	0	5	89	17	2	0	0	25	84
Lachnospiraceae_[G-3] bacterium_HMT_100 (SP38)	54	2	0	6	1	9	3	2	0	0	18	27	2	6	0	5	1	0	20
Campylobacter gracilis (SP39)	94	25	0	35	98	4	8	12	12	29	16	35	5	11	43	14	53	59	28
Prevotella shahii (SP393)	14	0	0	8	0	2	0	0	0	2	4	2	10	6	0	0	2	0	5
Lachnoanaerobaculum orale (SP403)	110	256	0	18	32	119	44	32	1	6	32	104	35	40	39	28	125	87	9
Leptotrichia sp._HMT_225 (SP407)	254	1	1	66	0	20	0	13	0	9	8	12	59	31	0	2	0	15	163
Lachnospiraceae_[G-2] bacterium_HMT_096 (SP408)	438	442	0	42	37	249	0	49	74	6	11	21	28	51	32	49	0	190	92
Prevotella sp._HMT_472 (SP413)	16	0	0	3	55	0	17	1	1	4	0	0	24	1	5	0	0	0	0
Leptotrichia sp._HMT_218 (SP420)	4857	298	0	120	19	169	0	172	95	7	3	37	17	585	21	106	3	282	53
Oribacterium asaccharolyticum (SP427)	17	70	0	10	0	55	3	25	15	0	6	13	8	8	4	2	0	39	9
Prevotella fusca (SP43)	5	2	0	0	8	84	0	0	5	1	9	6	7	3	0	0	9	0	0
Fusobacterium periodonticum (SP431)	336	1545	0	181	52	23	240	387	0	5	643	94	1082	652	311	255	10	27	596
Treponema denticola (SP432)	0	10	0	6	0	15	0	0	5	6	12	9	27	3	0	0	92	3	0
Treponema lecithinolyticum (SP44)	0	2	0	19	0	0	0	0	4	1	3	11	1	1	0	0	64	22	0
Kingella oralis (SP449)	59	75	0	32	34	10	30	12	262	114	6	249	6	23	56	72	18	22	74
Centipeda periodontii (SP45)	14	0	0	0	1	2	4	3	7	3	8	33	1	5	1	0	1	6	5
Prevotella sp._HMT_309 (SP454)	6	88	0	10	0	41	0	36	0	4	0	1	4	3	39	26	4	1	0
Prevotella oulorum (SP455)	169	24	0	19	64	12	28	23	38	62	20	34	6	7	135	38	89	46	9
Veillonellaceae_[G-1] bacterium_HMT_155 (SP456)	28	1	0	0	1	0	0	0	0	1	0	0	0	1	0	0	26	1	0
Alloprevotella rava (SP460)	1	167	0	39	11	319	0	103	0	3	11	3	28	10	1	47	384	17	6
Streptococcus anginosus (SP462)	0	9	0	0	0	14	0	0	7	2	42	188	65	0	0	3	17	192	0
Leptotrichia sp._HMT_212 (SP463)	44	2	0	26	4	23	131	24	0	5	39	49	41	8	59	6	3	9	181
Campylobacter concisus (SP470)	128	145	0	8	31	45	109	76	5	64	15	106	32	26	201	44	18	32	52
Prevotella intermedia (SP473)	0	28	0	22	0	47	0	0	20	28	2	12	38	15	0	0	0	3	0
Treponema sp._HMT_231 (SP474)	15	4	0	0	10	0	0	0	2	0	7	2	0	1	1	0	107	0	0
Porphyromonas sp._HMT_930 (SP485)	39	57	0	698	3	508	286	1261	8	1026	168	81	32	889	246	322	0	279	416
Peptostreptococcaceae_[XI][G-5] [Eubacterium]_saphenum (SP486)	0	6	0	0	0	2	0	0	0	0	40	45	34	0	0	0	0	4	0
Prevotella sp._HMT_942 (SP487)	14	37	0	48	1	14	0	206	0	3	1	0	2	108	4	0	0	24	41
Johnsonella sp._HMT_166 (SP488)	0	3	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
Prevotella multiformis (SP49)	0	186	0	0	0	0	0	0	0	5	5	70	92	13	0	8	1	0	0
Leptotrichia sp._HMT_909 (SP493)	6	0	0	21	0	2	0	0	0	0	1	3	3	20	0	0	0	3	7
Pseudostreptobacillus hongkongensis (SP494)	1	0	0	25	0	54	0	0	4	7	0	0	0	1	4	0	0	0	0
Anaeroglobus geminatus (SP496)	13	0	0	0	9	0	0	1	15	0	0	0	1	59	0	1	2934	0	2
Leptotrichia sp._HMT_219 (SP498)	0	0	0	3	0	2	7	4	0	7	12	22	0	0	29	9	1	2	7
Filifactor alocis (SP499)	0	23	0	17	0	37	0	0	4	3	19	57	62	7	0	0	0	3	0
Prevotella nigrescens (SP500)	75	488	0	11	111	3	63	60	63	48	5	9	4	12	51	6	4914	19	3
Lachnoanaerobaculum saburreum (SP503)	50	5	0	0	15	6	45	4	5	7	62	125	3	0	0	8	8	23	26
Prevotella micans (SP504)	47	13	0	0	1	0	3	0	0	1	10	20	0	5	14	1	8	18	6
Selenomonas flueggei (SP510)	22	0	0	0	5	0	4	6	1	1	0	11	0	1	0	0	1	0	0
Prevotella sp._HMT_304 (SP512)	0	0	0	0	0	0	0	0	5	4	0	0	66	0	0	0	0	0	0
Dialister pneumosintes (SP516)	0	25	0	24	0	19	0	0	3	0	7	64	7	3	0	0	536	12	3
Peptostreptococcus stomatis (SP522)	35	3	0	19	0	56	2	0	2	0	41	78	71	10	11	3	0	10	5
Stomatobaculum longum (SP525)	60	410	0	7	42	248	17	55	7	1	21	176	7	48	23	19	128	86	2
Treponema sp._HMT_256 (SP529)	0	1	0	3	0	0	0	0	2	0	0	2	7	4	0	0	1	0	0
Granulicatella elegans (SP53)	149	526	0	1608	172	2117	2680	2297	344	730	813	721	1906	2210	102	1446	229	2299	1776
Streptococcus mutans (SP535)	9	3	0	0	11	1	0	2	158	8	5	41	2	0	0	872	10	28	0
Bergeyella sp._HMT_907 (SP54)	6	4	0	10	1	2	12	0	1	5	7	23	1	0	9	0	0	4	9
Romboutsia timonensis (SP541)	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
Lachnospiraceae_[G-2] bacterium_HMT_088 (SP542)	0	0	0	11	0	14	0	0	0	0	1	3	0	0	0	0	0	0	48
Prevotella baroniae (SP55)	0	27	0	0	0	0	0	0	3	4	4	16	23	0	0	8	0	0	0
Granulicatella adiacens (SP550)	352	1065	0	221	163	972	854	52	19	77	672	716	921	283	164	211	41	282	483
Alloprevotella sp._HMT_473 (SP552)	34	934	0	291	0	900	221	977	47	60	8	273	79	1448	6	2	3	1088	822
Prevotella nanceiensis (SP558)	17	139	0	27	26	31	35	60	0	3	15	3	97	15	47	119	0	17	36
Treponema socranskii (SP56)	27	11	0	10	9	1	0	3	15	2	6	5	5	13	14	7	225	2	4
Streptobacillus felis (SP574)	0	0	0	40	0	0	0	0	0	0	0	0	257	1	0	0	0	0	0
Bacteroidetes_[G-3] bacterium_HMT_280 (SP576)	0	3	0	7	0	0	0	0	0	0	3	5	7	0	0	0	0	0	0
Campylobacter sp._HMT_044 (SP578)	5	2	0	18	0	96	0	5	7	0	4	127	0	5	0	0	0	0	2
Desulfobulbus sp._HMT_041 (SP579)	0	0	0	0	0	0	0	0	0	3	0	0	4	2	0	0	0	0	0
Prevotella koreensis (SP584)	0	4	0	0	0	0	0	0	0	0	2	0	10	5	0	0	0	0	0
Bacteroidales_[G-2] bacterium_HMT_274 (SP585)	292	52	0	64	9	3	0	0	4	7	3	32	9	17	45	0	0	18	7
Actinomyces graevenitzii (SP590)	9	142	0	5	0	863	2	0	0	0	26	41	73	86	43	38	0	21	4
Prevotella aurantiaca (SP594)	3	91	0	0	0	0	0	73	0	3	6	1	1	0	316	0	0	0	4
Prevotella sp._HMT_317 (SP597)	88	6	0	14	55	10	13	35	1	53	10	43	22	15	16	10	11	21	53
Prevotella multisaccharivorax (SP60)	0	0	0	0	0	0	0	0	2	5	0	18	0	0	0	0	2742	0	0
Mycoplasma faucium (SP603)	0	44	0	7	0	10	0	0	12	2	4	14	36	2	0	0	0	6	0
Leptotrichia sp._HMT_215 (SP61)	173	208	0	5	13	9	8	76	0	1	142	317	197	229	27	27	0	10	127
Porphyromonas gingivalis (SP62)	0	0	0	0	0	6	0	0	0	0	8	0	384	7	0	0	0	3	0
Leptotrichia sp._HMT_847 (SP63)	9	28	0	48	11	0	0	8	71	16	9	5	17	2	2	17	159	46	0
Prevotella saccharolytica (SP636)	47	1	0	0	14	1	0	2	1	4	4	5	2	3	7	2	3	5	11
Prevotella sp._HMT_300 (SP642)	20	15	0	0	0	0	2	16	18	7	2	0	1	11	0	0	40	0	5
Prevotella melaninogenica (SP65)	171	2047	0	81	34	296	171	431	5	33	140	59	481	453	981	382	8	121	256
Prevotella denticola (SP652)	40	3	0	0	11	0	0	14	44	10	0	53	34	33	0	6	5443	21	11
Corynebacterium matruchotii (SP654)	1198	61	0	39	115	31	41	4	128	132	243	3452	58	38	1	81	15	284	129
Peptostreptococcaceae_[XI][G-9] [Eubacterium]_brachy (SP655)	10	25	0	56	2	1	1	1	0	2	36	81	12	2	0	3	0	54	0
Leptotrichia sp._HMT_417 (SP663)	4124	185	0	102	46	558	70	529	225	36	64	360	102	870	49	122	37	1646	207
Capnocytophaga gingivalis (SP695)	17	17	0	33	29	17	39	1	7	8	20	41	4	10	49	13	0	3	8
Treponema sp._HMT_951 (SP700)	0	7	0	3	0	2	0	0	3	0	0	0	3	0	0	0	0	4	0
Pseudoramibacter alactolyticus (SP705)	0	0	0	0	0	0	0	0	5	0	0	0	3	0	0	1	24	0	0
Megasphaera micronuciformis (SP709)	86	601	0	4	6	314	3	78	12	1	24	8	22	17	109	24	6	25	0
Atopobium sp._HMT_199 (SP712)	0	0	0	5	0	0	0	0	20	1	16	23	19	2	0	0	71	17	0
Haemophilus parainfluenzae (SP713)	1238	4245	0	839	1403	268	2769	1510	5	1329	2691	1106	4282	1101	5903	1208	264	512	3344
Streptococcus intermedius (SP72)	12	18	0	11	21	6	18	10	15	2	50	59	4	20	0	64	8	51	9
Oribacterium sinus (SP723)	50	400	0	38	20	12	51	61	0	3	45	45	13	8	35	17	3	23	113
Bergeyella sp._HMT_322 (SP729)	11	11	0	10	12	10	134	31	2	9	12	46	32	19	145	5	0	9	103
Treponema sp._HMT_246 (SP731)	0	39	0	0	0	1	3	0	0	0	27	57	10	16	0	0	0	11	1
Butyrivibrio sp._HMT_455 (SP740)	0	14	0	0	0	7	0	5	0	0	0	0	0	0	0	5	0	1	0
Peptostreptococcaceae_[XI][G-4] bacterium_HMT_369 (SP743)	0	0	0	0	0	0	0	0	0	0	13	11	3	0	0	0	0	0	0
Leptotrichia sp._HMT_217 (SP75)	0	0	0	0	0	0	0	2	0	0	0	0	0	3	0	0	0	0	4
Catonella morbi (SP76)	17	32	0	4	0	4	7	7	0	0	3	3	5	3	27	3	0	0	6
Peptostreptococcaceae_[XI][G-6] [Eubacterium]_nodatum (SP760)	0	1	0	0	0	0	0	0	0	0	11	0	51	1	0	0	0	0	0
Cardiobacterium hominis (SP763)	7	8	0	23	59	7	50	1	2	30	31	76	4	1	23	32	1	11	58
Peptidiphaga sp._HMT_183 (SP765)	8	27	0	2	130	1	0	1	20	1	15	23	5	0	0	119	0	7	0
Prevotella maculosa (SP766)	178	16	0	6	27	6	10	8	5	16	15	10	2	4	2	11	16	27	6
Corynebacterium durum (SP775)	17	43	0	7	127	27	186	5	8	28	9	234	17	19	12	10	14	71	10
Schaalia lingnae_[Not_Validly_Published] (SP78)	2	39	0	0	0	147	0	1	0	0	12	4	18	10	10	17	0	0	2
Rothia aeria (SP781)	18	27	0	42	525	71	35	3	20	56	50	94	29	110	63	48	27	432	78
Schaalia sp._HMT_172 (SP792)	53	400	0	15	0	303	0	14	0	0	47	30	106	76	21	30	0	14	17
Bergeyella sp._HMT_206 (SP793)	0	311	0	181	1	3	6	5	0	263	0	101	59	42	1	0	444	0	67
Treponema sp._HMT_238 (SP807)	0	57	0	0	0	0	0	0	0	0	16	23	49	0	0	0	0	14	0
Limosilactobacillus mucosae (SP822)	0	0	0	0	7	0	1	0	0	1	0	6	0	0	0	0	553	0	0
Leptotrichia hongkongensis (SP836)	51	106	0	10	303	28	415	91	144	44	95	580	38	59	46	145	376	277	53
Alloprevotella sp._HMT_308 (SP839)	14	177	0	8	13	40	4	39	0	5	3	4	2	20	188	14	3	4	2
Cryptobacterium curtum (SP845)	3	0	0	2	0	0	0	0	6	0	1	0	0	0	0	0	211	5	0
Fretibacterium sp._HMT_360 (SP852)	0	2	0	5	0	0	0	0	0	0	0	9	5	0	0	0	0	3	0
Mogibacterium timidum (SP853)	0	1	0	7	0	0	0	0	2	0	9	0	2	0	0	0	0	2	0
Streptococcus sanguinis (SP860)	1606	92	0	3156	1028	281	954	47	180	583	1394	709	357	73	6	308	155	780	1087
Fretibacterium fastidiosum (SP864)	0	2	0	9	0	0	0	0	0	0	1	3	2	1	0	0	5	5	0
Leptotrichia sp._HMT_221 (SP866)	473	488	0	286	5	199	26	646	78	32	23	252	138	623	105	149	28	134	34
Stomatobaculum sp._HMT_097 (SP869)	14	0	0	2	1	3	0	105	0	0	33	0	92	1	0	3	0	6	39
Oribacterium parvum (SP870)	1	4	0	4	0	9	0	23	0	0	6	0	5	2	2	0	0	0	6
Peptostreptococcaceae_[XI][G-1] [Eubacterium]_infirmum (SP876)	25	2	0	23	0	0	0	0	2	0	12	1	2	4	0	1	31	10	2
Treponema sp._HMT_257 (SP98)	0	146	0	0	25	0	13	0	12	1	26	6	74	3	0	0	0	6	3
Scardovia wiggsiae (SP99)	26	2	0	11	4	0	0	0	62	3	0	0	9	0	6	4	9	17	2
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] [Eubacterium] yurii_[Eubacterium]_yurii_subsp._schtitka_[Eubacterium]_yurii_subsps._yurii_&_margaretiae (SPP1)	3	3	0	25	1	1	0	0	0	6	8	19	0	0	65	4	26	3	16
Streptococcus anginosus_constellatus (SPP101)	3	3	0	41	8	16	0	13	28	1	76	91	55	13	0	3	14	36	5
Aggregatibacter segnis_sp._HMT_458_sp._HMT_512 (SPP106)	139	196	0	64	1372	32	255	169	9	349	430	557	573	77	76	114	62	70	132
Atopobium_Lancefieldella rimae (SPP107)	12	5	0	22	4	0	0	13	17	1	5	15	1	1	0	1	42	45	6
Streptococcus dentirousetti_downei_sobrinus (SPP110)	40	2	0	0	13	0	1	0	16	3	0	3	2	0	0	73	3	0	11
Selenomonas sp._HMT_136_sp._HMT_149_sp._HMT_478 (SPP116)	49	25	0	10	9	28	0	14	32	4	2	28	2	8	53	15	42	9	1
Fusobacterium hwasookii_sp._HMT_370 (SPP117)	585	22	0	23	32	409	19	152	5	20	165	253	113	71	14	26	24	17	383
Lachnoanaerobaculum gingivalis_umeaense (SPP118)	95	20	0	18	8	2	69	27	0	3	63	81	46	28	8	10	3	16	87
Atopobium_Lancefieldella parvula_parvulum (SPP127)	33	102	0	27	4	263	0	30	4	1	18	19	31	21	46	29	3	64	13
Leptotrichia sp._HMT_215_sp._HMT_217 (SPP129)	5	0	0	0	0	0	0	0	0	0	0	6	10	1	0	0	0	0	4
Fusobacterium nucleatum_subsp._animalis_simiae (SPP13)	108	4	0	7	9	11	0	19	2	11	31	33	10	5	0	16	458	28	14
Streptococcus cristatus_cristatus_clade_578_cristatus_clade_886_ ...(4 species) (SPP131)	580	236	0	99	262	321	381	35	52	121	1091	858	650	196	2	411	97	721	429
Prevotella sp._HMT_292_sp._HMT_293_sp._HMT_300 (SPP132)	60	15	0	3	19	0	0	4	2	8	0	0	0	9	0	4	227	18	1
Kingella_Neisseria denitrificans_elongata (SPP133)	101	42	0	61	10	6	263	8	1	187	228	872	34	19	80	90	28	15	72
Leptotrichia_Pseudoleptotrichia goodfellowii (SPP135)	4	3	0	23	46	0	4	1	0	6	0	7	6	3	92	11	19	6	2
Campylobacter rectus_showae (SPP142)	28	43	0	24	22	19	10	0	12	19	20	112	93	18	1	8	39	2	37
Porphyromonas pasteri_sp._HMT_278 (SPP148)	199	135	0	33	58	47	792	168	1	51	135	194	978	109	41	183	13	17	439
Porphyromonas catoniae_pasteri_sp._HMT_278 (SPP149)	16	128	0	26	0	370	113	15	3	42	8	6	40	24	9	463	3	253	94
Centipeda_Selenomonas dianae_noxia_periodontii (SPP15)	165	3	0	0	1	1	8	0	0	1	3	14	0	0	2	1	6	10	0
Haemophilus haemolyticus_influenzae_seminalis_sp._HMT_036_sp._ ...(5 species) (SPP150)	33	274	0	1106	509	1811	629	2253	105	3090	380	871	755	1468	337	487	31	432	801
Porphyromonas catoniae_sp._HMT_275_sp._HMT_277_sp._HMT_284 (SPP151)	1	31	0	14	8	1	58	3	0	11	3	1	9	3	68	25	0	8	132
Selenomonas sp._HMT_442_sputigena (SPP152)	216	20	0	4	2	9	8	7	32	1	17	81	19	28	3	8	37	110	25
Mesocricetibacter_Pasteurella_Rodentibacter caecimuris_heidelbergensis_heylii_intestinalis_pne ...(6 species) (SPP153)	12	3	0	0	2	0	45	4	0	18	5	5	5	6	0	3	5	7	7
Catonella morbi_sp._HMT_164 (SPP154)	7	10	0	1	1	0	2	1	6	0	26	36	15	1	7	1	4	7	2
Hallella_Prevotella dentalis_seregens (SPP156)	0	1	0	0	0	0	0	0	2	2	1	5	18	3	0	0	0	1	0
Morococcus_Neisseria cerebrosus_flava_macacae_mucosa_sicca (SPP157)	3056	252	0	1406	588	345	6855	1445	62	4628	3425	3655	711	150	4313	495	313	1323	2300
Gemella haemolysans_morbillorum_sanguinis_sp._MOT-043 (SPP16)	610	537	0	3543	929	2046	1772	1369	267	545	4130	5068	4994	2592	219	5101	130	2718	4937
Streptococcus salivarius_thermophilus_vestibularis (SPP160)	651	804	0	670	416	4024	29	32	790	103	267	334	743	432	1	2780	6	773	1532
Kingella sp._HMT_459_sp._HMT_932 (SPP166)	6	1	0	28	0	0	3	0	0	0	0	4	2	2	5	3	17	4	19
Streptococcus australis_parasanguinis_parasanguinis_clade_411_pa ...(7 species) (SPP171)	282	1030	0	332	309	3526	104	26	43	58	1046	136	876	393	3	614	9	181	505
Fusobacterium canifelinum_naviforme_nucleatum_nucleatum_subsp._p ...(6 species) (SPP2)	124	71	0	0	13	6	0	6	1	9	39	61	36	27	19	11	4	6	47
Treponema medium_sp._HMT_230_sp._HMT_237_vincentii (SPP20)	5	21	0	0	5	7	1	0	0	0	4	7	5	0	0	0	0	3	1
Parvimonas_Peptostreptococcus Candidatus massiliensis_micra_sp._HMT_110_sp._HMT_ ...(4 species) (SPP27)	2	0	0	12	0	0	1	1	4	0	44	18	23	9	1	0	0	21	39
Streptococcus gordonii_himalayensis_sp._HMT_056 (SPP28)	1010	222	0	139	144	236	34	89	156	375	1358	1267	996	522	2	1645	84	534	1059
Fusobacterium naviforme_nucleatum_nucleatum_subsp._vincentii (SPP3)	163	163	0	197	228	22	79	20	41	100	61	251	12	27	4	45	95	116	32
Selenomonas dianae_infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146 ...(11 species) (SPP30)	3	1	0	0	0	4	1	0	0	0	0	4	0	1	0	0	11	0	0
Selenomonas infelix_sp._HMT_126_sp._HMT_138_sp._HMT_146_sp._HM ...(9 species) (SPP31)	73	19	0	1	8	7	3	8	6	10	25	45	0	24	1	9	21	47	13
Haemophilus parahaemolyticus_paraphrohaemolyticus_sputorum (SPP32)	7	78	0	265	10	33	0	147	0	152	41	6	150	129	139	54	11	0	653
Aggregatibacter aphrophilus_paraphrophilus (SPP34)	1	0	0	54	0	25	0	0	2	161	16	0	65	8	178	34	0	5	23
Prevotella sp._HMT_306_vespertina (SPP36)	250	621	0	38	4	1050	0	186	29	15	10	22	101	98	1497	111	33	361	5
Prevotella histicola_jejuni_scopos_sp._HMT_306_sp._HMT_313_sp ...(7 species) (SPP37)	28	56	0	0	0	5	0	21	0	1	2	4	21	41	61	42	1	6	0
Fusobacterium canifelinum_nucleatum_nucleatum_subsp._polymorphum ...(4 species) (SPP4)	566	76	0	47	156	23	165	75	5	210	197	491	52	126	46	89	30	74	374
Mogibacterium diversum_neglectum_pumilum_vescum (SPP41)	16	19	0	11	3	67	0	3	1	0	11	21	20	10	5	11	15	55	7
Neisseria cinerea_flavescens_perflava_subflava (SPP43)	618	1058	0	4702	46	140	764	65	1	422	2523	1594	2384	3883	491	656	116	31	2042
Treponema maltophilum_sp._HMT_260 (SPP44)	0	1	0	0	0	0	0	0	4	2	0	3	2	0	0	0	0	0	0
Eikenella_Neisseria canis_halliae (SPP47)	12	7	0	0	23	12	32	0	2	6	13	23	4	1	0	0	0	0	5
Prevotella sp._HMT_313_veroralis (SPP49)	130	55	0	0	5	18	0	35	0	4	15	13	51	29	80	61	3	21	0
Fusobacterium nucleatum_nucleatum_subsp._nucleatum_sp._HMT_203 (SPP5)	91	2	0	0	19	2	27	5	2	26	23	49	13	17	1	13	91	87	41
Escherichia_Pseudescherichia_Shigella boydii_coli_fergusonii_flexneri_marmotae_sonnei_vu ...(7 species) (SPP50)	5	13	0	13	3	5	14	14	5	10	16	11	11	6	7	4	9	6	7
Veillonella parvula_rogosae_tobetsuensis (SPP53)	252	84	0	58	77	23	120	140	18	57	82	43	106	140	213	187	138	52	332
Lautropia dentalis_mirabilis (SPP54)	70	8	0	139	1	120	8	14	54	1537	86	37	46	1	2376	19	79	67	213
Streptococcus hongkongensis_porcinus_salivarius_thermophilus_ube ...(6 species) (SPP55)	122	114	0	10	17	139	2	9	42	51	83	94	239	131	0	811	0	52	432
Tannerella sp._HMT_286_sp._HMT_808 (SPP57)	152	14	0	12	46	7	15	45	1	12	53	102	17	12	12	3	15	27	46
Veillonella atypica_dispar (SPP58)	937	4588	0	213	222	1460	296	749	72	106	170	212	313	778	1709	581	80	696	76
Alloprevotella sp._HMT_912_sp._HMT_913 (SPP59)	12	16	0	0	44	10	17	1	0	4	1	10	0	5	0	0	17	0	4
Fusobacterium nucleatum_nucleatum_subsp._animalis (SPP6)	386	121	0	185	105	29	41	75	16	23	98	111	35	49	4	74	2779	124	46
Treponema medium_sp._HMT_237 (SPP60)	5	21	0	3	0	1	0	0	4	2	16	3	4	1	2	0	16	0	1
Prevotella scopos_sp._HMT_314 (SPP61)	59	78	0	20	1	0	0	32	14	33	63	14	88	69	1	105	0	18	0
Prevotella histicola_jejuni_melaninogenica_scopos_sp._HMT_313 ...(6 species) (SPP63)	114	41	0	0	6	1	1	92	1	6	15	22	94	12	5	84	3	40	42
Prevotella jejuni_scopos_sp._HMT_313_sp._HMT_314 (SPP64)	45	47	0	6	1	7	14	67	0	8	10	4	26	77	16	11	1	2	2
Prevotella melaninogenica_scopos_sp._HMT_314 (SPP65)	1264	123	0	6	364	7	183	464	25	42	174	239	562	93	9	991	18	829	157
Fretibacterium sp._HMT_358_sp._HMT_359_sp._HMT_361_sp._HMT_362 (SPP66)	0	6	0	0	0	0	0	0	0	0	2	4	5	0	0	0	0	0	0
Prevotella histicola_melaninogenica (SPP67)	40	264	0	0	0	7	0	48	0	5	9	11	40	62	148	82	5	6	9
Prevotella jejuni_sp._HMT_313 (SPP68)	369	695	0	25	0	1195	0	876	3	4	20	8	82	69	290	70	24	101	4
Actinomyces johnsonii_naeslundii_sp._HMT_170_sp._HMT_171 (SPP69)	207	33	0	17	128	1	0	3	106	28	43	85	1	4	3	22	11	36	4
Streptococcus cristatus_downii_gordonii_gwangjuense_infantis_inf ...(18 species) (SPP7)	3428	7956	0	10046	7636	7510	12245	13171	2346	8102	7677	10059	11673	6628	44	8301	2393	13160	11128
Actinomyces naeslundii_oris_sp._HMT_169_sp._HMT_171_sp._HMT_17 ...(6 species) (SPP70)	290	290	0	86	280	85	168	3	268	79	211	656	47	44	51	89	17	486	165
Peptoanaerobacter_Peptostreptococcaceae_[XI][G-7] bacterium_HMT_081_stomatis (SPP72)	0	10	0	0	0	0	0	0	3	0	12	0	1	0	0	1	0	7	1
Peptococcus sp._HMT_167_sp._HMT_168 (SPP76)	43	15	0	11	0	2	0	0	2	2	3	4	9	1	0	0	31	0	2
Bacteroidaceae_[G-1]_Phocaeicola abscessus_bacterium_HMT_272 (SPP78)	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	0
Eikenella_Kingella halliae_sp._HMT_012 (SPP8)	27	0	0	0	0	0	4	1	0	19	40	93	1	0	3	10	0	0	8
Streptococcus lactarius_peroris_sp._HMT_074 (SPP80)	12	10	0	2	5	1	0	3	1	10	38	23	23	41	0	43	0	5	28
Streptococcus australis_lactarius_parasanguinis_parasanguinis_cl ...(10 species) (SPP81)	204	158	0	7	28	120	7	19	6	86	748	344	513	161	0	292	11	91	266
Prevotella shahii_sp._HMT_317 (SPP83)	188	8	0	1	19	2	19	2	0	14	1	7	4	13	0	15	37	0	27
Bifidobacterium dentium_moukalabense (SPP85)	1	0	0	0	0	0	0	0	0	0	0	95	0	0	0	0	2886	37	0
Leptotrichia buccalis_sp._HMT_225 (SPP86)	72	0	0	17	2	0	0	14	2	4	2	19	19	16	4	5	7	8	47
Porphyromonas endodontalis_sp._HMT_285 (SPP90)	0	12	0	10	0	1	0	0	2	12	73	419	347	14	1	0	0	67	1
Prevotella loescheii_sp._HMT_472 (SPP91)	68	10	0	19	0	10	1	3	2	12	11	23	1	2	7	5	1	1	55
Aggregatibacter sp._HMT_513_sp._HMT_898 (SPP93)	1	0	0	21	2	35	2	53	0	37	26	1	437	163	13	38	0	5	336
Schaalia odontolytica_odontolyticus_sp._HMT_180 (SPP94)	41	899	0	8	14	159	7	1	2	1	40	102	42	26	4	21	1	30	23
Kocuria assamensis_palustris (SPP95)	2	1	0	7	2	1	0	0	12	660	0	1	0	0	0	29	0	1	2
